Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.88□□□□□ -0.19
HCN1O60741 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.88□□□□□ -0.19
HCN1O60741 MBLAC2-202ENST00000514906 1936 ntBASIC13.88□□□□□ -0.19
HCN1O60741 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HCN1O60741 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.88□□□□□ -0.19
HCN1O60741 AC099336.1-201ENST00000417053 1171 ntBASIC13.88□□□□□ -0.19
HCN1O60741 FAM21FP-201ENST00000426241 1131 ntBASIC13.88□□□□□ -0.19
HCN1O60741 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.88□□□□□ -0.19
HCN1O60741 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 BNIP3P42-201ENST00000454982 569 ntBASIC13.88□□□□□ -0.19
HCN1O60741 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.88□□□□□ -0.19
HCN1O60741 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.88□□□□□ -0.19
HCN1O60741 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 SAMD11P1-201ENST00000571429 661 ntBASIC13.88□□□□□ -0.19
HCN1O60741 GNRHR2-203ENST00000581100 1187 ntBASIC13.88□□□□□ -0.19
HCN1O60741 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.88□□□□□ -0.19
HCN1O60741 BNIP3P29-201ENST00000598302 571 ntBASIC13.88□□□□□ -0.19
HCN1O60741 AC011447.5-201ENST00000616168 564 ntBASIC13.88□□□□□ -0.19
HCN1O60741 AC132938.4-201ENST00000623835 848 ntBASIC13.88□□□□□ -0.19
HCN1O60741 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 PRSS30P-206ENST00000641773 873 ntBASIC13.88□□□□□ -0.19
HCN1O60741 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HCN1O60741 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.88□□□□□ -0.19
HCN1O60741 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HCN1O60741 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 AC018442.1-201ENST00000421439 2061 ntBASIC13.87□□□□□ -0.19
HCN1O60741 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
HCN1O60741 AC131212.3-201ENST00000624087 4219 ntBASIC13.87□□□□□ -0.19
HCN1O60741 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HCN1O60741 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 ACTBP8-201ENST00000403258 1108 ntBASIC13.87□□□□□ -0.19
HCN1O60741 CNN2P8-201ENST00000421872 913 ntBASIC13.87□□□□□ -0.19
HCN1O60741 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.87□□□□□ -0.19
HCN1O60741 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 AL033527.4-201ENST00000641026 673 ntBASIC13.87□□□□□ -0.19
HCN1O60741 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.87□□□□□ -0.19
HCN1O60741 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HCN1O60741 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms