Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC3O60481 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC3O60481 AC006122.1-201ENST00000493323 440 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 AC106794.1-201ENST00000506935 792 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC3O60481 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC3O60481 AC013355.1-201ENST00000562625 723 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 AC103810.3-201ENST00000583567 96 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 AC020914.3-201ENST00000594712 304 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC3O60481 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC3O60481 AL136295.7-201ENST00000619226 1200 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC3O60481 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ZIC3O60481 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC3O60481 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC3O60481 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ZIC3O60481 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC3O60481 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ZIC3O60481 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.21□□□□□ -0.29
ZIC3O60481 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
ZIC3O60481 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC3O60481 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC3O60481 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC3O60481 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 MARK2P5-201ENST00000507649 634 ntBASIC13.21□□□□□ -0.29
ZIC3O60481 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC3O60481 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.21□□□□□ -0.29
ZIC3O60481 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 SORD2P-201ENST00000558556 1069 ntBASIC13.21□□□□□ -0.29
ZIC3O60481 AC027237.1-201ENST00000560942 655 ntBASIC13.21□□□□□ -0.29
ZIC3O60481 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC3O60481 AL132994.2-201ENST00000603120 687 ntBASIC13.21□□□□□ -0.29
ZIC3O60481 MIR6074-201ENST00000612054 107 ntBASIC13.21□□□□□ -0.29
ZIC3O60481 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ZIC3O60481 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC3O60481 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC3O60481 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC3O60481 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
ZIC3O60481 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
ZIC3O60481 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC3O60481 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 TUBBP5-203ENST00000508529 1334 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 AC097359.2-201ENST00000604992 2389 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ZIC3O60481 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC3O60481 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms