Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 MIR3615-201ENST00000581999 87 ntBASIC15.3■□□□□ 0.04
MSI1O43347 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 AC097359.2-201ENST00000604992 2389 ntBASIC15.3■□□□□ 0.04
MSI1O43347 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.3■□□□□ 0.04
MSI1O43347 MIR6787-201ENST00000616675 61 ntBASIC15.3■□□□□ 0.04
MSI1O43347 LINC00552-201ENST00000625151 2579 ntBASIC15.3■□□□□ 0.04
MSI1O43347 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.3■□□□□ 0.04
MSI1O43347 Z98259.2-201ENST00000641583 609 ntBASIC15.3■□□□□ 0.04
MSI1O43347 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MSI1O43347 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.3■□□□□ 0.04
MSI1O43347 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 AC140479.7-201ENST00000636301 2332 ntBASIC15.29■□□□□ 0.04
MSI1O43347 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 MBLAC2-202ENST00000514906 1936 ntBASIC15.29■□□□□ 0.04
MSI1O43347 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MSI1O43347 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 AC004899.1-201ENST00000424687 1714 ntBASIC15.29■□□□□ 0.04
MSI1O43347 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.29■□□□□ 0.04
MSI1O43347 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 AL008718.2-201ENST00000609206 1313 ntBASIC15.29■□□□□ 0.04
MSI1O43347 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.29■□□□□ 0.04
MSI1O43347 NKAIN1P1-201ENST00000435754 582 ntBASIC15.29■□□□□ 0.04
MSI1O43347 AL645933.1-201ENST00000440087 609 ntBASIC15.29■□□□□ 0.04
MSI1O43347 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 SERPINA13P-202ENST00000478994 924 ntBASIC15.29■□□□□ 0.04
MSI1O43347 AP001258.2-201ENST00000529891 490 ntBASIC15.29■□□□□ 0.04
MSI1O43347 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.29■□□□□ 0.04
MSI1O43347 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.29■□□□□ 0.04
MSI1O43347 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.29■□□□□ 0.04
MSI1O43347 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 AP001267.2-201ENST00000532619 2086 ntBASIC15.29■□□□□ 0.04
MSI1O43347 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
MSI1O43347 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSI1O43347 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MSI1O43347 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 AC139749.1-202ENST00000617529 3139 ntBASIC15.28■□□□□ 0.04
MSI1O43347 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 AC126755.1-201ENST00000525846 6405 ntBASIC15.28■□□□□ 0.04
MSI1O43347 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MSI1O43347 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.28■□□□□ 0.04
MSI1O43347 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.28■□□□□ 0.04
MSI1O43347 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.28■□□□□ 0.04
MSI1O43347 AL035414.1-201ENST00000451327 857 ntBASIC15.28■□□□□ 0.04
MSI1O43347 RPL18P13-201ENST00000478088 569 ntBASIC15.28■□□□□ 0.04
MSI1O43347 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.28■□□□□ 0.04
MSI1O43347 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.28■□□□□ 0.04
MSI1O43347 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
MSI1O43347 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.28■□□□□ 0.04
MSI1O43347 BNIP3P13-201ENST00000599968 566 ntBASIC15.28■□□□□ 0.04
MSI1O43347 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MSI1O43347 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MSI1O43347 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MSI1O43347 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.28■□□□□ 0.04
MSI1O43347 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms