Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF1O43189 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PHF1O43189 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF1O43189 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 BX640514.1-201ENST00000583223 1918 ntBASIC12.86□□□□□ -0.35
PHF1O43189 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.86□□□□□ -0.35
PHF1O43189 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.86□□□□□ -0.35
PHF1O43189 AC026410.3-201ENST00000514280 936 ntBASIC12.86□□□□□ -0.35
PHF1O43189 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 AC068587.3-201ENST00000526613 355 ntBASIC12.86□□□□□ -0.35
PHF1O43189 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 AC016629.1-201ENST00000596579 586 ntBASIC12.86□□□□□ -0.35
PHF1O43189 AC015967.2-201ENST00000624092 234 ntBASIC12.86□□□□□ -0.35
PHF1O43189 AC006435.4-201ENST00000625037 234 ntBASIC12.86□□□□□ -0.35
PHF1O43189 AL356737.1-201ENST00000634391 234 ntBASIC12.86□□□□□ -0.35
PHF1O43189 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.86□□□□□ -0.35
PHF1O43189 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 AL031595.1-201ENST00000623969 4709 ntBASIC12.86□□□□□ -0.35
PHF1O43189 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
PHF1O43189 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PHF1O43189 AC041040.2-201ENST00000622926 2899 ntBASIC12.86□□□□□ -0.35
PHF1O43189 AC131212.3-201ENST00000624087 4219 ntBASIC12.86□□□□□ -0.35
PHF1O43189 AC084364.1-201ENST00000551967 1556 ntBASIC12.86□□□□□ -0.35
PHF1O43189 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.85□□□□□ -0.35
PHF1O43189 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.85□□□□□ -0.35
PHF1O43189 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PHF1O43189 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.85□□□□□ -0.35
PHF1O43189 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.85□□□□□ -0.35
PHF1O43189 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.85□□□□□ -0.35
PHF1O43189 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.85□□□□□ -0.35
PHF1O43189 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
PHF1O43189 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 AP001582.1-201ENST00000525856 295 ntBASIC12.85□□□□□ -0.35
PHF1O43189 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.85□□□□□ -0.35
PHF1O43189 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PHF1O43189 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms