Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 AC003101.2-201ENST00000612557 442 ntBASIC14.01□□□□□ -0.17
AP4S1Q9Y587 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 STRCP1-201ENST00000509801 5328 ntBASIC14.01□□□□□ -0.17
AP4S1Q9Y587 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 AL035456.1-201ENST00000456064 1369 ntBASIC14□□□□□ -0.17
AP4S1Q9Y587 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 MTND6P24-201ENST00000440466 518 ntBASIC14□□□□□ -0.17
AP4S1Q9Y587 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14□□□□□ -0.17
AP4S1Q9Y587 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14□□□□□ -0.17
AP4S1Q9Y587 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14□□□□□ -0.17
AP4S1Q9Y587 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 AC092364.2-202ENST00000597012 1073 ntBASIC14□□□□□ -0.17
AP4S1Q9Y587 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14□□□□□ -0.17
AP4S1Q9Y587 LINC01115-203ENST00000606068 577 ntBASIC14□□□□□ -0.17
AP4S1Q9Y587 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14□□□□□ -0.17
AP4S1Q9Y587 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14□□□□□ -0.17
AP4S1Q9Y587 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14□□□□□ -0.17
AP4S1Q9Y587 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP4S1Q9Y587 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP4S1Q9Y587 PCDHB18P-202ENST00000526308 3197 ntBASIC13.99□□□□□ -0.17
AP4S1Q9Y587 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 MRPL3P1-201ENST00000400109 1033 ntBASIC13.99□□□□□ -0.17
AP4S1Q9Y587 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms