Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 AC106881.1-201ENST00000605849 3329 ntBASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AC004945.1-201ENST00000416738 983 ntBASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 HLA-K-203ENST00000430151 1046 ntBASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 FTLP10-202ENST00000505798 471 ntBASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 AC106820.3-201ENST00000561653 397 ntBASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA1Q9UND3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AL513477.1-201ENST00000602865 2407 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AL157414.3-201ENST00000624276 1954 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 EIF4HP1-201ENST00000453115 687 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 BX284668.4-201ENST00000453917 508 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 HIST2H2BC-201ENST00000498492 580 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC004466.1-201ENST00000599515 1080 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC138466.3-201ENST00000619983 221 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AP001002.3-201ENST00000623482 206 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms