Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AL021578.1-201ENST00000613646 709 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC100757.4-201ENST00000626934 759 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC068587.8-201ENST00000641239 219 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 TUBBP5-203ENST00000508529 1334 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC007292.2-201ENST00000593524 1812 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 SPTLC1P5-201ENST00000450718 252 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 RN7SL11P-201ENST00000471305 293 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 AC008805.1-201ENST00000590892 364 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 AC026740.1-201ENST00000607068 791 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 MIR6720-201ENST00000611664 98 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.56□□□□□ -0.24
LRFN1Q9P244 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRFN1Q9P244 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRFN1Q9P244 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LRFN1Q9P244 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LRFN1Q9P244 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LRFN1Q9P244 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.55□□□□□ -0.24
LRFN1Q9P244 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 LINC01101-201ENST00000622953 1884 ntBASIC13.55□□□□□ -0.24
LRFN1Q9P244 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.55□□□□□ -0.24
LRFN1Q9P244 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRFN1Q9P244 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms