Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 BX539320.1-201ENST00000623759 877 ntBASIC16.52■□□□□ 0.24
CBX8Q9HC52 Z92544.3-201ENST00000624747 417 ntBASIC16.52■□□□□ 0.24
CBX8Q9HC52 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CBX8Q9HC52 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CBX8Q9HC52 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CBX8Q9HC52 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CBX8Q9HC52 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CBX8Q9HC52 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CBX8Q9HC52 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 EIF3FP3-201ENST00000434851 1086 ntBASIC16.51■□□□□ 0.23
CBX8Q9HC52 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 HLA-J-203ENST00000494367 1087 ntBASIC16.51■□□□□ 0.23
CBX8Q9HC52 AC069120.2-201ENST00000524091 540 ntBASIC16.51■□□□□ 0.23
CBX8Q9HC52 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 AC093813.1-201ENST00000605066 256 ntBASIC16.51■□□□□ 0.23
CBX8Q9HC52 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CBX8Q9HC52 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX8Q9HC52 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 RNU1-114P-201ENST00000365297 166 ntBASIC16.5■□□□□ 0.23
CBX8Q9HC52 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 AC125807.1-201ENST00000483097 614 ntBASIC16.5■□□□□ 0.23
CBX8Q9HC52 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 SPDYE22P-201ENST00000582158 798 ntBASIC16.5■□□□□ 0.23
CBX8Q9HC52 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX8Q9HC52 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms