Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC017007.1-201ENST00000511960 415 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CD164-210ENST00000512821 964 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RNU6-277P-201ENST00000516272 106 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RNU6-889P-201ENST00000517189 103 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC023632.3-201ENST00000521633 145 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC138832.1-201ENST00000522871 556 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HSPA8P13-201ENST00000523715 472 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AP003122.3-201ENST00000526316 255 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC007375.1-201ENST00000554513 578 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC108134.2-201ENST00000570843 748 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 G6PC-204ENST00000592383 987 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 OR7D1P-201ENST00000592739 933 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 OR7A1P-201ENST00000601206 970 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC004835.2-201ENST00000603762 682 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AL035413.2-201ENST00000604801 525 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AL096865.1-201ENST00000606796 927 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AL390240.1-201ENST00000612950 384 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC107075.1-201ENST00000613695 314 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AL355974.3-201ENST00000617383 467 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PDE4DIP-249ENST00000620605 823 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC006504.8-201ENST00000621046 635 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC01002-230ENST00000633592 568 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PTPN2-203ENST00000353319 1542 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM19-204ENST00000549735 1772 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC007613.1-201ENST00000572811 2597 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.88
KRTAP3-3Q9BYR6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 THAP1-202ENST00000345117 1943 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC009021.2-201ENST00000567401 1666 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 TEX21P-204ENST00000641479 1693 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC104581.1-202ENST00000635932 2618 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PHACTR2P1-201ENST00000605639 1414 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 MTND5P7-201ENST00000413558 1798 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms