Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AC011742.3-201ENST00000439053 820 ntBASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AC012441.2-201ENST00000444843 739 ntBASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 SPTLC1P5-201ENST00000450718 252 ntBASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AC131206.1-201ENST00000538078 1211 ntBASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AL136295.7-201ENST00000619226 1200 ntBASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAIPQ9BWF2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 SNX18-202ENST00000343017 3140 ntBASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 AC104073.2-201ENST00000453737 312 ntBASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 GCOM2-201ENST00000509133 1104 ntBASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 AC026740.1-201ENST00000607068 791 ntBASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAIPQ9BWF2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AJ011931.1-201ENST00000618749 2492 ntBASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 RN7SL769P-201ENST00000469386 295 ntBASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 SNORD3B-2-202ENST00000571722 791 ntBASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AL132994.2-201ENST00000603120 687 ntBASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC090164.2-201ENST00000611487 516 ntBASIC16.17■□□□□ 0.18
TRAIPQ9BWF2 AC091812.3-201ENST00000621362 345 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms