Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC025279.2-201ENST00000569730 653 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 SAMD11P1-201ENST00000571429 661 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 AC112220.4-201ENST00000604982 1263 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 AL023583.1-201ENST00000607518 1143 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 MIR6775-201ENST00000617557 69 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AC006927.4-201ENST00000639187 543 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AC007787.1-201ENST00000588095 1583 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 SYT14P1-202ENST00000600441 1448 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AC104457.1-201ENST00000401024 814 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AL139094.1-201ENST00000405549 1188 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 KLF2P2-201ENST00000416807 1039 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AL117351.1-201ENST00000438864 766 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 YBX1P6-201ENST00000442962 1002 ntBASIC13.41□□□□□ -0.26
USB1Q9BQ65 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.41□□□□□ -0.26
USB1Q9BQ65 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USB1Q9BQ65 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AL109954.1-202ENST00000564051 2148 ntBASIC13.4□□□□□ -0.26
USB1Q9BQ65 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms