Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 KHSRPP1-201ENST00000427983 1768 ntBASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLPTM1LQ96KA5 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 AC135782.3-201ENST00000562782 2105 ntBASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 AL079307.3-201ENST00000556114 283 ntBASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 MIR6069-201ENST00000620069 79 ntBASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLPTM1LQ96KA5 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CLPTM1LQ96KA5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLPTM1LQ96KA5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.2□□□□□ -0.14
CLPTM1LQ96KA5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms