Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AL512638.1-201ENST00000457493 794 ntBASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AC104596.2-201ENST00000512793 793 ntBASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AL391069.4-201ENST00000609583 481 ntBASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AL691403.2-201ENST00000618460 490 ntBASIC12.94□□□□□ -0.34
CPNE2Q96FN4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 AC007431.3-201ENST00000623221 587 ntBASIC12.94□□□□□ -0.34
CPNE2Q96FN4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPNE2Q96FN4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 CLK3P2-201ENST00000427566 1453 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 TLE1P1-201ENST00000422965 589 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 HLA-K-203ENST00000430151 1046 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 AC022616.1-201ENST00000518688 554 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 KRT8P14-201ENST00000414254 1442 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CPNE2Q96FN4 AC022144.1-201ENST00000602255 1580 ntBASIC12.93□□□□□ -0.34
CPNE2Q96FN4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms