Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 FOXO1B-201ENST00000504678 1527 ntBASIC13.7□□□□□ -0.22
HPS1Q92902 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 AC005034.1-201ENST00000426657 489 ntBASIC13.7□□□□□ -0.22
HPS1Q92902 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC13.7□□□□□ -0.22
HPS1Q92902 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.7□□□□□ -0.22
HPS1Q92902 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.7□□□□□ -0.22
HPS1Q92902 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.7□□□□□ -0.22
HPS1Q92902 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC13.7□□□□□ -0.22
HPS1Q92902 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HPS1Q92902 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 AC004241.5-201ENST00000623870 2448 ntBASIC13.7□□□□□ -0.22
HPS1Q92902 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 MIR661-201ENST00000384842 89 ntBASIC13.69□□□□□ -0.22
HPS1Q92902 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 PIN1P1-201ENST00000412108 996 ntBASIC13.69□□□□□ -0.22
HPS1Q92902 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC13.69□□□□□ -0.22
HPS1Q92902 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.69□□□□□ -0.22
HPS1Q92902 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC13.69□□□□□ -0.22
HPS1Q92902 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.69□□□□□ -0.22
HPS1Q92902 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 AL035252.4-201ENST00000624174 288 ntBASIC13.69□□□□□ -0.22
HPS1Q92902 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 AC022144.1-201ENST00000602255 1580 ntBASIC13.69□□□□□ -0.22
HPS1Q92902 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HPS1Q92902 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.69□□□□□ -0.22
HPS1Q92902 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HPS1Q92902 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 AC114271.1-201ENST00000612689 2813 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms