Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 OR2X1P-201ENST00000421144 687 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC007969.1-201ENST00000433675 447 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 KLF2P4-201ENST00000451959 1225 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC022447.6-201ENST00000515522 438 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 RN7SL819P-201ENST00000581896 270 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AL162574.2-201ENST00000614618 657 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 INTS4P1-203ENST00000641008 3683 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 GRK6P1-201ENST00000400595 1711 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 MTCO1P15-201ENST00000529569 1526 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 KRT8P35-201ENST00000483942 1338 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 AL161772.1-201ENST00000610494 4412 ntBASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTCD2Q8WV60 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 RPL7P3-201ENST00000441388 714 ntBASIC15.1■□□□□ 0.01
PTCD2Q8WV60 AL590640.2-201ENST00000457038 527 ntBASIC15.1■□□□□ 0.01
PTCD2Q8WV60 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 KRT90P-201ENST00000549264 1064 ntBASIC15.1■□□□□ 0.01
PTCD2Q8WV60 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.1■□□□□ 0.01
PTCD2Q8WV60 AC126365.2-201ENST00000580630 379 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms