Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AC007274.2-201ENST00000421675 662 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AL596276.2-201ENST00000447525 331 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RCC2P8-201ENST00000502779 1035 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 ALG3P1-201ENST00000508806 1114 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 AP000346.4-201ENST00000614827 381 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 FAM90A7P-201ENST00000382628 1395 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 FAM90A23P-201ENST00000400136 1395 ntBASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ISCA2P1-201ENST00000425548 448 ntBASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 CICP12-201ENST00000455801 843 ntBASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 MIR6720-201ENST00000611664 98 ntBASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 AC013726.1-201ENST00000563747 2285 ntBASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms