Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 KRT18P44-201ENST00000416086 1285 ntBASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 AC000077.1-201ENST00000420012 953 ntBASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 AL359092.2-201ENST00000423330 585 ntBASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 POLR2LP1-206ENST00000444785 187 ntBASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 DPY19L2P4-201ENST00000479881 442 ntBASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 AP001462.1-201ENST00000594089 452 ntBASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL22A1Q8NFW1 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 AL391005.1-201ENST00000623953 2435 ntBASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 AC022447.5-201ENST00000504817 392 ntBASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL22A1Q8NFW1 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 HDGF-202ENST00000368206 960 ntTSL 5 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 AC103592.1-201ENST00000394513 664 ntBASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 AC010086.2-201ENST00000428616 226 ntBASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 PEBP1P3-201ENST00000455475 548 ntBASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 AP000533.1-201ENST00000456143 1177 ntBASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 RPL29P2-201ENST00000488409 460 ntBASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
COL22A1Q8NFW1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 RN7SKP212-201ENST00000410851 328 ntBASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 AC007679.1-201ENST00000458609 502 ntBASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 MARK2P17-201ENST00000498560 841 ntBASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 RNA5SP420-201ENST00000516997 137 ntBASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 CLPP-205ENST00000596605 646 ntTSL 2 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 AC123912.6-201ENST00000612657 315 ntBASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL22A1Q8NFW1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms