Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MFF-204ENST00000353339 2186 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AL662890.1-201ENST00000396818 632 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AL133499.1-201ENST00000596207 608 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 CYP46A4P-201ENST00000414953 267 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC104306.2-201ENST00000451877 341 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC091812.3-201ENST00000621362 345 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AL162426.1-201ENST00000624141 743 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC068587.10-201ENST00000641210 219 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 FES-204ENST00000414248 2327 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 FXNP2-201ENST00000411625 547 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 CD8B2-202ENST00000417670 633 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC253536.4-201ENST00000440539 267 ntBASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 BLK-205ENST00000529894 2017 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 FOS-202ENST00000535987 1402 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE1Q8NF91 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 AC102953.2-201ENST00000609755 3026 ntBASIC4.61□□□□□ -1.67
SYNE1Q8NF91 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 UFM1-202ENST00000379649 846 ntTSL 4 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 BTBD6P1-201ENST00000412176 1267 ntBASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 MIR4783-201ENST00000580343 82 ntBASIC4.61□□□□□ -1.67
SYNE1Q8NF91 UBL5-208ENST00000593087 320 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE1Q8NF91 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms