Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 RNVU1-8-201ENST00000364272 125 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AC073869.2-201ENST00000417338 1026 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AC112504.1-201ENST00000623415 1841 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AC012508.2-201ENST00000567613 1472 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 LINC02447-202ENST00000501888 2146 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AC098657.1-201ENST00000416270 1135 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 OR8T1P-201ENST00000421347 918 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AL035414.1-201ENST00000451327 857 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 URB1-AS1-201ENST00000534991 831 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 RN7SL121P-201ENST00000584223 273 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 AL118522.1-201ENST00000611368 560 ntBASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC168Q8NDH2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 GEMIN8P4-201ENST00000380526 729 ntBASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 RPS18P9-201ENST00000482817 460 ntBASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC168Q8NDH2 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms