Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
KDM1BQ8NB78 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
KDM1BQ8NB78 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
KDM1BQ8NB78 AC117489.1-201ENST00000625169 3217 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.05■□□□□ -0
KDM1BQ8NB78 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.05■□□□□ -0
KDM1BQ8NB78 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.05■□□□□ -0
KDM1BQ8NB78 EIF4HP1-201ENST00000453115 687 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.05■□□□□ -0
KDM1BQ8NB78 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.05■□□□□ -0
KDM1BQ8NB78 AC013355.1-201ENST00000562625 723 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.05■□□□□ -0
KDM1BQ8NB78 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.05■□□□□ -0
KDM1BQ8NB78 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.05■□□□□ -0
KDM1BQ8NB78 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.05■□□□□ -0
KDM1BQ8NB78 AC068587.8-201ENST00000641239 219 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
KDM1BQ8NB78 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.05■□□□□ -0
KDM1BQ8NB78 E2F3P2-201ENST00000447755 1422 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.05■□□□□ -0
KDM1BQ8NB78 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
KDM1BQ8NB78 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 AC113367.3-201ENST00000508316 1912 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.05■□□□□ -0
KDM1BQ8NB78 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.05■□□□□ -0
KDM1BQ8NB78 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 INTS4P1-203ENST00000641008 3683 ntBASIC15.05■□□□□ -0
KDM1BQ8NB78 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.05■□□□□ -0
KDM1BQ8NB78 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KDM1BQ8NB78 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
KDM1BQ8NB78 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 AC018442.1-201ENST00000421439 2061 ntBASIC15.04■□□□□ -0
KDM1BQ8NB78 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 AC004899.1-201ENST00000424687 1714 ntBASIC15.04■□□□□ -0
KDM1BQ8NB78 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.04■□□□□ -0
KDM1BQ8NB78 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.04■□□□□ -0
KDM1BQ8NB78 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.04■□□□□ -0
KDM1BQ8NB78 MARK2P5-201ENST00000507649 634 ntBASIC15.04■□□□□ -0
KDM1BQ8NB78 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 AC009884.2-201ENST00000603110 324 ntBASIC15.04■□□□□ -0
KDM1BQ8NB78 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 AC027601.3-201ENST00000622907 509 ntBASIC15.04■□□□□ -0
KDM1BQ8NB78 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
KDM1BQ8NB78 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.04■□□□□ -0
KDM1BQ8NB78 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KDM1BQ8NB78 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.04■□□□□ -0
KDM1BQ8NB78 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms