Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AC003686.1-201ENST00000550956 1034 ntBASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC60Q8IWA6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 CICP24-201ENST00000605464 2705 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 OR2R1P-201ENST00000441404 914 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 AL133466.1-201ENST00000447582 150 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 UPF3AP2-201ENST00000457924 1132 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 RNA5SP423-201ENST00000517127 109 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 AC090857.1-201ENST00000527400 390 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 FGFR3P5-201ENST00000564496 886 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 AC106872.11-201ENST00000605838 421 ntBASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC60Q8IWA6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 PDIA3P2-201ENST00000428073 158 ntBASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AC073150.1-201ENST00000450406 1084 ntBASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 RN7SL720P-201ENST00000488178 304 ntBASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AC027237.1-201ENST00000560942 655 ntBASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AC023824.1-201ENST00000562945 2975 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms