Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 AC055876.2-201ENST00000531834 546 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 RARRES2P5-201ENST00000564013 466 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 AC099568.2-201ENST00000609194 695 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 AC025048.6-201ENST00000634326 1161 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AGGF1P1-201ENST00000509500 2073 ntBASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 TOMM22P5-201ENST00000416399 439 ntBASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 RRP7BP-205ENST00000566851 833 ntBASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC140912.1-201ENST00000577171 1054 ntBASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC073548.1-201ENST00000624088 1882 ntBASIC13.22□□□□□ -0.29
LRRC28Q86X40 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC28Q86X40 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC28Q86X40 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 DMBT1P1-203ENST00000636837 4628 ntBASIC13.21□□□□□ -0.29
LRRC28Q86X40 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 CHCHD2P3-201ENST00000603038 451 ntBASIC13.21□□□□□ -0.29
LRRC28Q86X40 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms