Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNE3Q6ZMZ3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AC079776.1-201ENST00000401540 1152 ntBASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AC004945.1-201ENST00000416738 983 ntBASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 RN7SL713P-201ENST00000582127 302 ntBASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AC239800.4-201ENST00000603712 296 ntBASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AL354702.1-201ENST00000442006 1960 ntBASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNE3Q6ZMZ3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 HILS1-202ENST00000545329 423 ntBASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms