Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AC011498.7-201ENST00000624986 2027 ntBASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 CLK3P2-201ENST00000427566 1453 ntBASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AL035456.1-201ENST00000456064 1369 ntBASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 METTL21AP1-201ENST00000438852 635 ntBASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AC000095.1-201ENST00000603208 874 ntBASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 AC215219.1-201ENST00000400706 1817 ntBASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ANKRD55Q3KP44 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AL157996.1-201ENST00000624684 2299 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms