Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 MIR769-201ENST00000390225 118 ntBASIC15.22■□□□□ 0.03
ATXN3P54252 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 MIR663B-201ENST00000408361 115 ntBASIC15.22■□□□□ 0.03
ATXN3P54252 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.22■□□□□ 0.03
ATXN3P54252 POM121L10P-201ENST00000436994 1285 ntBASIC15.22■□□□□ 0.03
ATXN3P54252 AL133466.1-201ENST00000447582 150 ntBASIC15.22■□□□□ 0.03
ATXN3P54252 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.22■□□□□ 0.03
ATXN3P54252 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.22■□□□□ 0.03
ATXN3P54252 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ATXN3P54252 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.22■□□□□ 0.03
ATXN3P54252 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.22■□□□□ 0.03
ATXN3P54252 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.22■□□□□ 0.03
ATXN3P54252 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.22■□□□□ 0.03
ATXN3P54252 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.22■□□□□ 0.03
ATXN3P54252 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ATXN3P54252 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATXN3P54252 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ATXN3P54252 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATXN3P54252 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ATXN3P54252 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.21■□□□□ 0.03
ATXN3P54252 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ATXN3P54252 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 HIST2H2BC-201ENST00000498492 580 ntBASIC15.21■□□□□ 0.03
ATXN3P54252 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.21■□□□□ 0.03
ATXN3P54252 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.21■□□□□ 0.03
ATXN3P54252 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATXN3P54252 CU633904.3-201ENST00000624042 1029 ntBASIC15.21■□□□□ 0.03
ATXN3P54252 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ATXN3P54252 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATXN3P54252 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.21■□□□□ 0.02
ATXN3P54252 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
ATXN3P54252 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ATXN3P54252 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
ATXN3P54252 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.2■□□□□ 0.02
ATXN3P54252 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.2■□□□□ 0.02
ATXN3P54252 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATXN3P54252 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.2■□□□□ 0.02
ATXN3P54252 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.2■□□□□ 0.02
ATXN3P54252 RN7SL769P-201ENST00000469386 295 ntBASIC15.2■□□□□ 0.02
ATXN3P54252 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.2■□□□□ 0.02
ATXN3P54252 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 AC126915.1-201ENST00000522847 1038 ntBASIC15.2■□□□□ 0.02
ATXN3P54252 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 AC105129.2-201ENST00000559536 390 ntBASIC15.2■□□□□ 0.02
ATXN3P54252 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.2■□□□□ 0.02
ATXN3P54252 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.2■□□□□ 0.02
ATXN3P54252 AC097359.3-201ENST00000603982 1210 ntBASIC15.2■□□□□ 0.02
ATXN3P54252 ECM1P1-201ENST00000604092 1279 ntBASIC15.2■□□□□ 0.02
ATXN3P54252 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.2■□□□□ 0.02
ATXN3P54252 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.2■□□□□ 0.02
ATXN3P54252 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.2■□□□□ 0.02
ATXN3P54252 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ATXN3P54252 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 AJ011931.1-201ENST00000618749 2492 ntBASIC15.2■□□□□ 0.02
ATXN3P54252 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.2■□□□□ 0.02
ATXN3P54252 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATXN3P54252 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.19■□□□□ 0.02
ATXN3P54252 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms