Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
KRT6CP48668 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
KRT6CP48668 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KRT6CP48668 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 DMBT1P1-203ENST00000636837 4628 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KRT6CP48668 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 FO681548.1-201ENST00000455617 1132 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 AC022137.2-201ENST00000503482 481 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.39□□□□□ -0.11
KRT6CP48668 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
KRT6CP48668 AC027796.2-201ENST00000575326 344 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 AC008494.3-201ENST00000606615 944 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 AC010327.5-201ENST00000586923 3061 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6CP48668 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 MRPL37P1-201ENST00000592451 1337 ntBASIC14.39□□□□□ -0.11
KRT6CP48668 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6CP48668 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6CP48668 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT6CP48668 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT6CP48668 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KRT6CP48668 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
KRT6CP48668 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 AC093433.1-201ENST00000458048 571 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.38□□□□□ -0.11
KRT6CP48668 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT6CP48668 AC140912.1-201ENST00000577171 1054 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 CTBP2P3-201ENST00000585629 1255 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 WFDC1-204ENST00000613603 549 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 AC006504.5-208ENST00000588784 2401 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms