Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.49□□□□□ -0.09
TRIM23P36406 AC133540.1-201ENST00000620845 1019 ntBASIC14.49□□□□□ -0.09
TRIM23P36406 AC138627.1-207ENST00000641560 1006 ntBASIC14.49□□□□□ -0.09
TRIM23P36406 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM23P36406 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRIM23P36406 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRIM23P36406 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRIM23P36406 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRIM23P36406 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 AC015688.4-201ENST00000580780 1647 ntBASIC14.48□□□□□ -0.09
TRIM23P36406 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM23P36406 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 CICP14-201ENST00000629111 2732 ntBASIC14.48□□□□□ -0.09
TRIM23P36406 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM23P36406 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 AL662890.1-201ENST00000396818 632 ntBASIC14.48□□□□□ -0.09
TRIM23P36406 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM23P36406 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM23P36406 IGHJ2P-201ENST00000454480 60 ntBASIC14.48□□□□□ -0.09
TRIM23P36406 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIM23P36406 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
TRIM23P36406 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 AL157791.1-201ENST00000553667 1699 ntBASIC14.48□□□□□ -0.09
TRIM23P36406 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.48□□□□□ -0.09
TRIM23P36406 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM23P36406 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM23P36406 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM23P36406 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM23P36406 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 AL354702.1-201ENST00000442006 1960 ntBASIC14.47□□□□□ -0.09
TRIM23P36406 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 AC068587.6-202ENST00000641839 5619 ntBASIC14.47□□□□□ -0.09
TRIM23P36406 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms