Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 LINC00554-201ENST00000564841 3011 ntBASIC17.92■□□□□ 0.46
TM4SF1P30408 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TM4SF1P30408 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TM4SF1P30408 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TM4SF1P30408 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF1P30408 AC019109.1-201ENST00000401725 1874 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 HLA-DPA2-205ENST00000433582 733 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 GRPEL2P1-201ENST00000453145 339 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 BPIFB5P-201ENST00000457066 1099 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 RN7SL375P-201ENST00000492442 298 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TM4SF1P30408 AC092862.1-201ENST00000541534 533 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TM4SF1P30408 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.91■□□□□ 0.46
TM4SF1P30408 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.91■□□□□ 0.46
TM4SF1P30408 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF1P30408 AC145285.5-201ENST00000562217 361 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 AC005586.2-201ENST00000563946 837 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 AC008972.2-201ENST00000606587 494 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.91■□□□□ 0.46
TM4SF1P30408 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF1P30408 CICP6-201ENST00000457191 2729 ntBASIC17.91■□□□□ 0.46
TM4SF1P30408 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF1P30408 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF1P30408 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF1P30408 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF1P30408 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TM4SF1P30408 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
TM4SF1P30408 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 BX679664.3-201ENST00000414070 555 ntBASIC17.9■□□□□ 0.46
TM4SF1P30408 AC113935.1-201ENST00000471722 555 ntBASIC17.9■□□□□ 0.46
TM4SF1P30408 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF1P30408 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.9■□□□□ 0.46
TM4SF1P30408 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
TM4SF1P30408 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF1P30408 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF1P30408 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF1P30408 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF1P30408 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TM4SF1P30408 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TM4SF1P30408 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF1P30408 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TM4SF1P30408 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF1P30408 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.89■□□□□ 0.46
TM4SF1P30408 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.89■□□□□ 0.46
TM4SF1P30408 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF1P30408 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TM4SF1P30408 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TM4SF1P30408 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 AL357373.1-201ENST00000394974 322 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.89■□□□□ 0.45
TM4SF1P30408 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.89■□□□□ 0.45
TM4SF1P30408 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AL161932.2-201ENST00000435436 679 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms