Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.28□□□□□ -0.12
CAPN3P20807 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 MYADML-201ENST00000474610 2147 ntBASIC14.28□□□□□ -0.12
CAPN3P20807 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.28□□□□□ -0.12
CAPN3P20807 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.28□□□□□ -0.12
CAPN3P20807 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 DUX4L47-201ENST00000566374 394 ntBASIC14.28□□□□□ -0.12
CAPN3P20807 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN3P20807 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.27□□□□□ -0.12
CAPN3P20807 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.27□□□□□ -0.12
CAPN3P20807 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.27□□□□□ -0.12
CAPN3P20807 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 TCAM1P-207ENST00000485295 1537 ntBASIC14.27□□□□□ -0.12
CAPN3P20807 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN3P20807 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CAPN3P20807 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.27□□□□□ -0.12
CAPN3P20807 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN3P20807 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN3P20807 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.13
CAPN3P20807 AC135586.1-201ENST00000539323 574 ntBASIC14.27□□□□□ -0.13
CAPN3P20807 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CAPN3P20807 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CAPN3P20807 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPN3P20807 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPN3P20807 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPN3P20807 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN3P20807 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CAPN3P20807 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN3P20807 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CAPN3P20807 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN3P20807 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN3P20807 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CAPN3P20807 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 AC023794.5-201ENST00000564380 2157 ntBASIC14.26□□□□□ -0.13
CAPN3P20807 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN3P20807 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CAPN3P20807 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN3P20807 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms