Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC006335.1-201ENST00000445200 547 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 HLA-J-204ENST00000495278 958 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC079328.1-201ENST00000560358 952 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC008132.1-202ENST00000342005 1389 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC232323.1-201ENST00000540724 2099 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC244394.1-201ENST00000435000 1665 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AL157791.1-201ENST00000553667 1699 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 RN7SKP214-201ENST00000364208 315 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 IMP3P2-201ENST00000489760 475 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 GCOM2-201ENST00000509133 1104 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC027601.3-201ENST00000622907 509 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC023090.2-201ENST00000625182 2110 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 LINC00528-201ENST00000600723 2160 ntBASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40ALP0C0E4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms