Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.39□□□□□ -0.27
FREM3P0C091 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
FREM3P0C091 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.39□□□□□ -0.27
FREM3P0C091 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.39□□□□□ -0.27
FREM3P0C091 AC026740.1-201ENST00000607068 791 ntBASIC13.39□□□□□ -0.27
FREM3P0C091 AC091544.8-201ENST00000619490 361 ntBASIC13.39□□□□□ -0.27
FREM3P0C091 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
FREM3P0C091 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.39□□□□□ -0.27
FREM3P0C091 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
FREM3P0C091 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
FREM3P0C091 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
FREM3P0C091 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 CHMP1AP1-201ENST00000445563 662 ntBASIC13.39□□□□□ -0.27
FREM3P0C091 AKR7A2P1-201ENST00000460134 915 ntBASIC13.39□□□□□ -0.27
FREM3P0C091 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.39□□□□□ -0.27
FREM3P0C091 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.39□□□□□ -0.27
FREM3P0C091 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.39□□□□□ -0.27
FREM3P0C091 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 BX088702.1-201ENST00000610784 235 ntBASIC13.39□□□□□ -0.27
FREM3P0C091 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.39□□□□□ -0.27
FREM3P0C091 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FREM3P0C091 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.38□□□□□ -0.27
FREM3P0C091 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
FREM3P0C091 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
FREM3P0C091 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.38□□□□□ -0.27
FREM3P0C091 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.38□□□□□ -0.27
FREM3P0C091 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.38□□□□□ -0.27
FREM3P0C091 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
FREM3P0C091 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.38□□□□□ -0.27
FREM3P0C091 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
FREM3P0C091 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FREM3P0C091 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
FREM3P0C091 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FREM3P0C091 RN7SKP214-201ENST00000364208 315 ntBASIC13.37□□□□□ -0.27
FREM3P0C091 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FREM3P0C091 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FREM3P0C091 PDIA3P2-201ENST00000428073 158 ntBASIC13.37□□□□□ -0.27
FREM3P0C091 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.37□□□□□ -0.27
FREM3P0C091 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.37□□□□□ -0.27
FREM3P0C091 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.37□□□□□ -0.27
FREM3P0C091 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.37□□□□□ -0.27
FREM3P0C091 AC091271.1-201ENST00000611877 1162 ntBASIC13.37□□□□□ -0.27
FREM3P0C091 AL136301.1-201ENST00000615830 422 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms