Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 CYP4F23P-201ENST00000593402 1579 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
ZIC3O60481 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 LINC00552-201ENST00000625151 2579 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ZIC3O60481 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 AC016700.1-201ENST00000429424 312 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 FNTAP2-201ENST00000430308 634 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.23□□□□□ -0.29
ZIC3O60481 BX284668.4-201ENST00000453917 508 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.23□□□□□ -0.29
ZIC3O60481 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.23□□□□□ -0.29
ZIC3O60481 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.23□□□□□ -0.29
ZIC3O60481 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 PCDHA3-202ENST00000532566 4594 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 AP001267.2-201ENST00000532619 2086 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC3O60481 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.23□□□□□ -0.29
ZIC3O60481 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ZIC3O60481 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 AC138028.6-201ENST00000616106 1482 ntBASIC13.23□□□□□ -0.29
ZIC3O60481 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC3O60481 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ZIC3O60481 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 AC232323.1-201ENST00000540724 2099 ntBASIC13.22□□□□□ -0.29
ZIC3O60481 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC3O60481 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.22□□□□□ -0.29
ZIC3O60481 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC3O60481 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC3O60481 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC3O60481 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms