Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AC104306.2-201ENST00000451877 341 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AC022494.1-201ENST00000466044 728 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 GCOM2-201ENST00000509133 1104 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AP001002.3-201ENST00000623482 206 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AC009093.2-202ENST00000620513 2079 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AC015656.1-201ENST00000624209 3578 ntBASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AC092135.3-201ENST00000624151 1846 ntBASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AL354702.1-201ENST00000442006 1960 ntBASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 MIR663B-201ENST00000408361 115 ntBASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AC006033.1-201ENST00000440505 426 ntBASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AL008638.5-201ENST00000623814 1298 ntBASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
COL4A3BPQ9Y5P4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A3BPQ9Y5P4 AL136172.1-201ENST00000598590 1394 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 MRPL37P1-201ENST00000592451 1337 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 AC099548.2-209ENST00000480264 625 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 AC100850.1-201ENST00000506768 649 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 MIR6787-201ENST00000616675 61 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 AC002472.3-201ENST00000640124 621 ntBASIC16.51■□□□□ 0.23
COL4A3BPQ9Y5P4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms