Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TPRKBQ9Y3C4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 KRT18P2-201ENST00000447938 1258 ntBASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 BANF1P1-201ENST00000553684 263 ntBASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 AC034105.1-201ENST00000563488 319 ntBASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 MIR6069-201ENST00000620069 79 ntBASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TPRKBQ9Y3C4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 TOMM22P5-201ENST00000416399 439 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 UPK3BP1-201ENST00000428678 509 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AC079140.1-201ENST00000508039 487 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AC092364.2-202ENST00000597012 1073 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms