Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AL137783.1-201ENST00000623494 1896 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC006335.1-201ENST00000445200 547 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 PUDPP3-201ENST00000445368 636 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC009955.4-201ENST00000597192 544 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AL353726.2-201ENST00000623259 884 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AC068587.8-201ENST00000641239 219 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 AL157414.3-201ENST00000624276 1954 ntBASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 CICP13-201ENST00000422015 2789 ntBASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AC012441.2-201ENST00000444843 739 ntBASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 IMP3P2-201ENST00000489760 475 ntBASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AC090164.2-201ENST00000611487 516 ntBASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 AC136621.1-201ENST00000624017 2304 ntBASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms