Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 KRT18P13-201ENST00000400056 1290 ntBASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 RHOQP3-201ENST00000437982 621 ntBASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AC005412.3-201ENST00000580309 715 ntBASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 MIR4321-201ENST00000592276 80 ntBASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 AC012569.1-201ENST00000591191 1524 ntBASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBQLN2Q9UHD9 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 YBX2P1-201ENST00000394192 760 ntBASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AC074386.1-202ENST00000463561 864 ntBASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 PDPK2P-202ENST00000562415 1191 ntBASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AL078644.1-201ENST00000609881 752 ntBASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 AC023511.2-201ENST00000618803 211 ntBASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBQLN2Q9UHD9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms