Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 KHSRPP1-201ENST00000427983 1768 ntBASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SMC4Q9NTJ3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 KRT223P-202ENST00000449164 1292 ntBASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 AC133552.6-201ENST00000613406 534 ntBASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 AL136301.1-201ENST00000615830 422 ntBASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 COX11-210ENST00000639671 696 ntBASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 AC215219.1-201ENST00000400706 1817 ntBASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SMC4Q9NTJ3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 OR8S1-201ENST00000310194 1080 ntBASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 AP005482.1-201ENST00000563722 1273 ntBASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 MIR6805-201ENST00000615055 62 ntBASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 AC097376.2-205ENST00000610159 5334 ntBASIC18.93■□□□□ 0.62
SMC4Q9NTJ3 AC012617.1-204ENST00000586340 2305 ntBASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 AL023775.1-201ENST00000454907 1746 ntBASIC18.92■□□□□ 0.62
SMC4Q9NTJ3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms