Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.02□□□□□ -0.16
NEUROD4Q9HD90 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 RPS2P32-201ENST00000439199 892 ntBASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 AC093433.1-201ENST00000458048 571 ntBASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 WASH4P-201ENST00000564273 1246 ntBASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 RN7SL48P-201ENST00000579283 293 ntBASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.02□□□□□ -0.17
NEUROD4Q9HD90 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 FO681548.1-201ENST00000455617 1132 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 MYADML-201ENST00000474610 2147 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 GCOM2-201ENST00000509133 1104 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AC138696.2-201ENST00000607376 223 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 MIR6074-201ENST00000612054 107 ntBASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEUROD4Q9HD90 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms