Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTP4Q96DX8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RTP4Q96DX8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RTP4Q96DX8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RTP4Q96DX8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTP4Q96DX8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.03■□□□□ -0
RTP4Q96DX8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTP4Q96DX8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.03■□□□□ -0
RTP4Q96DX8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTP4Q96DX8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTP4Q96DX8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTP4Q96DX8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.03■□□□□ -0
RTP4Q96DX8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.02■□□□□ -0
RTP4Q96DX8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.02■□□□□ -0
RTP4Q96DX8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RTP4Q96DX8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RTP4Q96DX8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.02■□□□□ -0
RTP4Q96DX8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.02■□□□□ -0
RTP4Q96DX8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 ANKRD19P-201ENST00000338192 862 ntBASIC15.02■□□□□ -0
RTP4Q96DX8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.02■□□□□ -0
RTP4Q96DX8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.02■□□□□ -0
RTP4Q96DX8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.02■□□□□ -0
RTP4Q96DX8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.02■□□□□ -0
RTP4Q96DX8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.02■□□□□ -0
RTP4Q96DX8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.02■□□□□ -0
RTP4Q96DX8 AC104989.1-201ENST00000519711 778 ntBASIC15.02■□□□□ -0
RTP4Q96DX8 SLC25A47P1-201ENST00000531577 414 ntBASIC15.02■□□□□ -0
RTP4Q96DX8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RTP4Q96DX8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RTP4Q96DX8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.02■□□□□ -0
RTP4Q96DX8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.02■□□□□ -0
RTP4Q96DX8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.02■□□□□ -0
RTP4Q96DX8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.02■□□□□ -0
RTP4Q96DX8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.02■□□□□ -0
RTP4Q96DX8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.02■□□□□ -0
RTP4Q96DX8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTP4Q96DX8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTP4Q96DX8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTP4Q96DX8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTP4Q96DX8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTP4Q96DX8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
RTP4Q96DX8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 TUBB8P4-201ENST00000511806 1324 ntBASIC15.01□□□□□ -0.01
RTP4Q96DX8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.01□□□□□ -0.01
RTP4Q96DX8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 FAM8A4P-201ENST00000435433 1213 ntBASIC15.01□□□□□ -0.01
RTP4Q96DX8 AL161932.2-201ENST00000435436 679 ntBASIC15.01□□□□□ -0.01
RTP4Q96DX8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTP4Q96DX8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 AL590640.2-201ENST00000457038 527 ntBASIC15.01□□□□□ -0.01
RTP4Q96DX8 AC022494.1-201ENST00000466044 728 ntBASIC15.01□□□□□ -0.01
RTP4Q96DX8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RTP4Q96DX8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms