Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 ACTBP11-201ENST00000436287 1126 ntBASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 OR10B1P-201ENST00000601666 907 ntBASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AC020910.5-201ENST00000623668 1865 ntBASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 AL009178.2-201ENST00000597278 2719 ntBASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4CQ96CF2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AL391280.1-201ENST00000506969 1062 ntBASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AC091271.1-201ENST00000611877 1162 ntBASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AC006453.4-201ENST00000636949 1252 ntBASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 AC008687.7-202ENST00000637404 953 ntBASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 SNX18-202ENST00000343017 3140 ntBASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 KRT8P4-201ENST00000509735 1454 ntBASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4CQ96CF2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 POM121L8P-201ENST00000417732 1281 ntBASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 POM121L9P-203ENST00000441984 1285 ntBASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 AL355994.2-201ENST00000447882 704 ntBASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 RNA5SP412-201ENST00000516234 123 ntBASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4CQ96CF2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms