Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 VENTXP4-201ENST00000449029 958 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 IGHV1-12-201ENST00000518307 205 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 NAV1-210ENST00000593583 726 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 AC021016.3-201ENST00000608367 477 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 MROH4P-201ENST00000431302 1578 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 WASH3P-207ENST00000560956 1394 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 BPIFB5P-201ENST00000457066 1099 ntBASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 ALG1L3P-201ENST00000503331 765 ntBASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM43Q96BQ3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms