Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CSTP2-201ENST00000610599 398 ntBASIC23.84■■□□□ 1.41
TOPBP1Q92547 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TOPBP1Q92547 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TOPBP1Q92547 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TOPBP1Q92547 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TOPBP1Q92547 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TOPBP1Q92547 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TOPBP1Q92547 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TOPBP1Q92547 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC23.83■■□□□ 1.41
TOPBP1Q92547 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TOPBP1Q92547 AC113385.2-201ENST00000614465 762 ntBASIC23.83■■□□□ 1.41
TOPBP1Q92547 FAM226B-201ENST00000602508 1490 ntBASIC23.83■■□□□ 1.4
TOPBP1Q92547 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TOPBP1Q92547 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
TOPBP1Q92547 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC23.83■■□□□ 1.4
TOPBP1Q92547 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TOPBP1Q92547 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 AL121949.3-201ENST00000406684 385 ntBASIC23.82■■□□□ 1.4
TOPBP1Q92547 MAGEA7P-201ENST00000436482 942 ntBASIC23.82■■□□□ 1.4
TOPBP1Q92547 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 ACY3-202ENST00000529256 933 ntTSL 3 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 MT3-202ENST00000561640 514 ntTSL 3 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TOPBP1Q92547 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TOPBP1Q92547 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 ACTBP14-201ENST00000411655 1089 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 AC103563.1-201ENST00000429316 123 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 AC133141.1-201ENST00000443015 339 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 RHOQP2-201ENST00000449922 579 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 HNRNPA1P56-201ENST00000505767 954 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 BAK1P2-201ENST00000532665 631 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 AL049840.2-201ENST00000602722 535 ntBASIC23.81■■□□□ 1.4
TOPBP1Q92547 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOPBP1Q92547 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC23.81■■□□□ 1.4
TOPBP1Q92547 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOPBP1Q92547 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOPBP1Q92547 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TOPBP1Q92547 AC142086.5-202ENST00000562500 217 ntBASIC23.8■■□□□ 1.4
TOPBP1Q92547 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC23.8■■□□□ 1.4
TOPBP1Q92547 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 SHMT1P1-201ENST00000419974 1312 ntBASIC23.8■■□□□ 1.4
TOPBP1Q92547 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOPBP1Q92547 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC23.8■■□□□ 1.4
TOPBP1Q92547 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms