Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AL671277.1-201ENST00000429656 993 ntBASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AC004066.1-201ENST00000502488 802 ntBASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 MIR193BHG-211ENST00000641433 5365 ntBASIC11.09□□□□□ -0.63
NUP35Q8NFH5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 KRT18P43-201ENST00000469825 1281 ntBASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AC106730.1-201ENST00000566722 1090 ntBASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms