Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AL645937.2-201ENST00000396808 931 ntBASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 MIR943-201ENST00000401286 94 ntBASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AC093028.1-201ENST00000622998 982 ntBASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 PPT1-213ENST00000641319 2388 ntBASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 AC130686.1-201ENST00000622936 2466 ntBASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DNAAF1Q8NEP3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms