Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 LINC00528-201ENST00000600723 2160 ntBASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCDC168Q8NDH2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AC092896.1-201ENST00000465850 380 ntBASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 BCRP4-201ENST00000506079 804 ntBASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 HCG18-241ENST00000602290 821 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC168Q8NDH2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms