Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 GCOM2-201ENST00000509133 1104 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 PTP4A1P2-201ENST00000546033 454 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 MIR6074-201ENST00000612054 107 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 AC145423.3-201ENST00000615987 467 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AC136759.1-202ENST00000530858 2194 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AL136172.1-201ENST00000598590 1394 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ALG3P1-201ENST00000508806 1114 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 MIR5189-201ENST00000577370 114 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 BX088702.1-201ENST00000610784 235 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ENPP7P14-201ENST00000621765 1040 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 RPSAP52-203ENST00000622976 1023 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CICP16-201ENST00000502609 2813 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 AL138709.1-201ENST00000614840 1693 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CLUHP2-201ENST00000426660 1303 ntBASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.59□□□□□ -0.23
LSMEM1Q8N8F7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LSMEM1Q8N8F7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.58□□□□□ -0.23
LSMEM1Q8N8F7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LSMEM1Q8N8F7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LSMEM1Q8N8F7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 AC098614.1-201ENST00000368528 745 ntBASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms