Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.23□□□□□ -0.13
RAB43Q86YS6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.23□□□□□ -0.13
RAB43Q86YS6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AC079178.1-201ENST00000420915 656 ntBASIC14.23□□□□□ -0.13
RAB43Q86YS6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AL008638.5-201ENST00000623814 1298 ntBASIC14.23□□□□□ -0.13
RAB43Q86YS6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB43Q86YS6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB43Q86YS6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AL591846.1-201ENST00000451736 433 ntBASIC14.22□□□□□ -0.13
RAB43Q86YS6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AP006547.1-201ENST00000563435 692 ntBASIC14.22□□□□□ -0.13
RAB43Q86YS6 AC104982.3-201ENST00000581995 514 ntBASIC14.22□□□□□ -0.13
RAB43Q86YS6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AC005695.3-201ENST00000614522 232 ntBASIC14.22□□□□□ -0.13
RAB43Q86YS6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AC244452.3-201ENST00000636814 210 ntBASIC14.22□□□□□ -0.13
RAB43Q86YS6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms