Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TTTY23B-201ENST00000442790 549 ntBASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 FTH1P14-201ENST00000482930 551 ntBASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 AC233724.13-201ENST00000598383 410 ntBASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 AC244669.2-201ENST00000612320 853 ntBASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF549Q6P9A3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AC041040.2-201ENST00000622926 2899 ntBASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 COX5BP8-201ENST00000416911 349 ntBASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 FAM197Y7-201ENST00000432892 766 ntBASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 RNA5SP486-201ENST00000515961 83 ntBASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 MIR3197-201ENST00000582241 73 ntBASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 BTNL10-201ENST00000595971 695 ntBASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF549Q6P9A3 AC139712.1-201ENST00000378256 1875 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms