Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LPCAT4Q643R3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 AC112191.1-201ENST00000523689 701 ntBASIC13.96□□□□□ -0.17
LPCAT4Q643R3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 AC106818.1-201ENST00000623223 3242 ntBASIC13.96□□□□□ -0.17
LPCAT4Q643R3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LPCAT4Q643R3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LPCAT4Q643R3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LPCAT4Q643R3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
LPCAT4Q643R3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LPCAT4Q643R3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms