Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC092135.3-201ENST00000624151 1846 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 OR2X1P-201ENST00000421144 687 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 MTND2P11-201ENST00000423638 648 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AL596276.2-201ENST00000447525 331 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC006122.1-201ENST00000493323 440 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 HAUS1P1-201ENST00000505275 832 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC087752.4-201ENST00000605911 462 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC091046.1-201ENST00000331871 207 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC240504.1-201ENST00000395709 845 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC078875.1-201ENST00000431907 724 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC090857.1-201ENST00000527400 390 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC025423.2-201ENST00000537570 439 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC135178.5-201ENST00000602597 674 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC092384.3-202ENST00000564646 2873 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms